STRINGSTRING
czcA protein (Prevotella amnii) - STRING interaction network
"czcA" - Heavy metal efflux pump, CzcA family in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcAHeavy metal efflux pump, CzcA family (1440 aa)    
Predicted Functional Partners:
HMPREF9018_0096
Efflux transporter, RND family, MFP subunit (386 aa)
 
   
  0.980
HMPREF9018_1996
Efflux transporter, outer membrane factor lipoprotein, NodT family (459 aa)
 
 
  0.850
HMPREF9018_0230
Putative septum site-determining protein MinC (498 aa)
 
 
  0.668
HMPREF9018_0094
Uncharacterized protein (184 aa)
              0.628
HMPREF9018_0229
Auxiliary transport protein, membrane fusion protein (MFP) family protein (327 aa)
 
     
  0.534
HMPREF9018_1506
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (456 aa)
 
     
  0.528
HMPREF9018_0056
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (471 aa)
 
     
  0.428
HMPREF9018_0718
Copper-exporting ATPase (639 aa)
 
   
  0.427
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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