STRINGSTRING
HMPREF9018_0099 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0099" - Peptidase, U32 family in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0099Peptidase, U32 family (646 aa)    
Predicted Functional Partners:
HMPREF9018_0100
Uncharacterized protein (363 aa)
              0.787
HMPREF9018_0098
Uncharacterized protein (37 aa)
              0.482
HMPREF9018_0097
Uncharacterized protein (131 aa)
              0.482
pheT
Phenylalanyl-tRNA synthetase beta subunit (822 aa)
   
        0.458
HMPREF9018_1079
Phosphoribulokinase/uridine kinase family protein (553 aa)
   
        0.449
pheS
Phenylalanyl-tRNA synthetase alpha subunit (346 aa)
     
      0.449
udk
Uridine monophosphokinase (207 aa)
   
        0.422
ligA
Polydeoxyribonucleotide synthase [NAD(+)] ; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (676 aa)
         
  0.415
waaA
3-deoxy-D-manno-octulosonic-acid transferase (406 aa)
   
        0.404
HMPREF9018_0403
GTP cyclohydrolase 1 type 2 homolog (268 aa)
   
        0.404
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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