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STRINGSTRING
EFN90794.1 protein (Prevotella amnii) - STRING interaction network
"EFN90794.1" - annotation not available in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN90794.1annotation not available (58 aa)    
Predicted Functional Partners:
EFN90786.1
Conjugation system ATPase, TraG family; Identified by match to protein family HMM TIGR03783; similar to Bacteroides (981 aa)
 
          0.850
EFN90804.1
Conjugative transposon TraK protein; Identified by match to protein family HMM TIGR03781; similar to Bacteroides (205 aa)
 
          0.809
EFN90802.1
Conjugative transposon TraN protein; Identified by match to protein family HMM TIGR03780; similar to Bacteroides (291 aa)
 
          0.794
EFN90797.1
Conjugative transposon TraM protein; Identified by match to protein family HMM TIGR03779; similar to Bacteroides (439 aa)
 
          0.788
EFN90808.1
annotation not available (396 aa)
 
          0.786
EFN90977.1
annotation not available (724 aa)
   
          0.765
EFN90787.1
annotation not available (177 aa)
 
          0.737
EFN91420.1
annotation not available (667 aa)
   
          0.669
EFN91174.1
annotation not available (668 aa)
   
          0.667
EFN91756.1
annotation not available (168 aa)
   
          0.665
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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