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STRINGSTRING
EFN90780.1 protein (Prevotella amnii) - STRING interaction network
"EFN90780.1" - annotation not available in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN90780.1annotation not available (118 aa)    
Predicted Functional Partners:
EFN90786.1
Conjugation system ATPase, TraG family; Identified by match to protein family HMM TIGR03783; similar to Bacteroides (981 aa)
 
          0.830
EFN90808.1
annotation not available (396 aa)
 
          0.815
EFN90797.1
Conjugative transposon TraM protein; Identified by match to protein family HMM TIGR03779; similar to Bacteroides (439 aa)
 
          0.814
EFN90787.1
annotation not available (177 aa)
 
          0.811
EFN90802.1
Conjugative transposon TraN protein; Identified by match to protein family HMM TIGR03780; similar to Bacteroides (291 aa)
 
          0.811
EFN90796.1
Peptidase, M23 family; Identified by match to protein family HMM PF01551 (283 aa)
 
          0.800
EFN90804.1
Conjugative transposon TraK protein; Identified by match to protein family HMM TIGR03781; similar to Bacteroides (205 aa)
 
          0.785
EFN91756.1
annotation not available (168 aa)
   
          0.784
EFN90972.1
Putative plasmid recombination enzyme; Identified by match to protein family HMM PF01076 (503 aa)
   
          0.783
EFN91749.1
Identified by match to protein family HMM PF01624 (1326 aa)
   
          0.782
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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