STRINGSTRING
HMPREF9018_0150 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0150" - Toprim domain family protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0150Toprim domain family protein (342 aa)    
Predicted Functional Partners:
HMPREF9018_0151
Uncharacterized protein (511 aa)
 
          0.826
HMPREF9018_2032
Uncharacterized protein (88 aa)
 
          0.800
HMPREF9018_0149
Uncharacterized protein (198 aa)
              0.779
HMPREF9018_0152
Uncharacterized protein (45 aa)
              0.752
HMPREF9018_1473
MutS domain I protein (1326 aa)
   
          0.492
HMPREF9018_0740
TonB-dependent receptor (783 aa)
   
          0.491
HMPREF9018_0741
Uncharacterized protein (234 aa)
   
          0.471
HMPREF9018_1773
Conjugative transposon protein TraO (197 aa)
   
          0.454
HMPREF9018_0030
Uncharacterized protein (64 aa)
   
          0.415
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (7%) [HD]