STRINGSTRING
HMPREF9018_0154 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0154" - Glycosyltransferase, group 2 family protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0154Glycosyltransferase, group 2 family protein (352 aa)    
Predicted Functional Partners:
yqeV
tRNA methylthiotransferase YqeV (452 aa)
              0.883
ribF
Riboflavin biosynthesis protein (313 aa)
            0.749
rfbD
dTDP-4-dehydrorhamnose reductase (289 aa)
 
   
  0.711
ribE
Riboflavin synthase, alpha subunit (201 aa)
       
    0.699
holA
DNA polymerase III, delta subunit (342 aa)
 
          0.649
HMPREF9018_1723
Uncharacterized protein (215 aa)
   
          0.616
HMPREF9018_0782
Glycosyltransferase, group 2 family protein (318 aa)
 
     
  0.604
rfbB
dTDP-glucose 4,6-dehydratase (384 aa)
 
     
  0.580
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)
 
   
  0.538
HMPREF9018_1339
Uncharacterized protein (127 aa)
   
          0.494
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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