STRINGSTRING
HMPREF9018_0158 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0158" - Hemolysin in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0158Hemolysin (333 aa)    
Predicted Functional Partners:
HMPREF9018_0159
Uncharacterized protein (278 aa)
          0.994
HMPREF9018_0016
Uncharacterized protein (203 aa)
   
          0.504
ackA
Acetokinase ; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction (402 aa)
       
    0.469
secG
Preprotein translocase, SecG subunit (122 aa)
 
          0.464
HMPREF9018_2030
Uncharacterized protein (330 aa)
   
          0.459
HMPREF9018_1603
Acyltransferase (1194 aa)
   
   
  0.448
HMPREF9018_0690
Acyltransferase (255 aa)
   
   
  0.448
HMPREF9018_0577
Acyltransferase (181 aa)
   
   
  0.448
HMPREF9018_0012
Peptidase family M49 (658 aa)
   
          0.433
HMPREF9018_1354
DNA helicase (1140 aa)
 
          0.415
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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