STRINGSTRING
murE protein (Prevotella amnii) - STRING interaction network
"murE" - UDP-N-acetylmuramyl-tripeptide synthetase in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murEUDP-N-acetylmuramyl-tripeptide synthetase (485 aa)    
Predicted Functional Partners:
murF
D-alanyl-D-alanine-adding enzyme ; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (441 aa)
0.999
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) (443 aa)
 
 
0.997
mraY
UDP-MurNAc-pentapeptide phosphotransferase ; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (423 aa)
 
 
  0.991
HMPREF9018_0169
UDP-N-acetylmuramate--L-alanine ligase ; Cell wall formation (459 aa)
 
  0.987
HMPREF9018_0167
Cell cycle protein, FtsW/RodA/SpoVE family (432 aa)
 
  0.966
ddl
D-alanylalanine synthetase ; Cell wall formation (332 aa)
 
 
  0.964
HMPREF9018_0163
Penicillin-binding protein, transpeptidase domain protein (717 aa)
   
  0.949
alr
Alanine racemase (849 aa)
0.948
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase ; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (367 aa)
 
 
  0.943
murB
UDP-N-acetylmuramate dehydrogenase ; Cell wall formation (334 aa)
 
  0.937
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (8%) [HD]