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rimM protein (Prevotella amnii) - STRING interaction network
"rimM" - Ribosome maturation factor RimM in Prevotella amnii
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rimMRibosome maturation factor RimM ; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (173 aa)    
Predicted Functional Partners:
HMPREF9018_0194
Uncharacterized protein (199 aa)
 
          0.882
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase ; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (437 aa)
              0.862
dxr
2-C-methyl-D-erythritol 4-phosphate synthase ; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) (384 aa)
              0.773
yeaZ
Universal bacterial protein YeaZ (230 aa)
              0.673
HMPREF9018_0198
Zinc metalloprotease (466 aa)
 
          0.631
rnpA
Protein C5 ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (165 aa)
   
          0.595
HMPREF9018_0258
Uncharacterized protein (1110 aa)
   
          0.588
HMPREF9018_0192
Uncharacterized protein (301 aa)
              0.525
HMPREF9018_1876
Uncharacterized protein (148 aa)
   
          0.512
HMPREF9018_0287
Uncharacterized protein (840 aa)
   
          0.424
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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