STRINGSTRING
HMPREF9018_0231 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0231" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0231Uncharacterized protein (72 aa)    
Predicted Functional Partners:
HMPREF9018_0233
Putative cytochrome d ubiquinol oxidase, subunit II (380 aa)
 
          0.650
HMPREF9018_1300
Uncharacterized protein (319 aa)
   
          0.649
HMPREF9018_0328
Uncharacterized protein (116 aa)
   
          0.618
HMPREF9018_1418
Uncharacterized protein (119 aa)
   
          0.592
HMPREF9018_0232
Bacterial cytochrome ubiquinol oxidase (509 aa)
              0.587
HMPREF9018_1072
PAP2 family protein (324 aa)
   
          0.581
HMPREF9018_0230
Putative septum site-determining protein MinC (498 aa)
              0.566
HMPREF9018_1215
Uncharacterized protein (618 aa)
   
          0.509
HMPREF9018_0965
Uncharacterized protein (88 aa)
   
          0.505
HMPREF9018_0329
Uncharacterized protein (100 aa)
   
          0.495
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (7%) [HD]