STRINGSTRING
HMPREF9018_0254 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0254" - Thiamine diphosphokinase in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0254Thiamine diphosphokinase (224 aa)    
Predicted Functional Partners:
pnuC
Nicotinamide mononucleotide transporter PnuC (205 aa)
         
  0.879
HMPREF9018_0252
TonB-dependent receptor plug domain protein (799 aa)
              0.771
HMPREF9018_0755
Acid phosphatase (289 aa)
   
 
    0.763
surE
Nucleoside 5’-monophosphate phosphohydrolase ; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (253 aa)
       
    0.744
rsgA
Ribosome small subunit-dependent GTPase A ; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (314 aa)
       
    0.664
HMPREF9018_0217
Low molecular weight phosphotyrosine protein phosphatase (164 aa)
   
 
    0.632
HMPREF9018_2045
Uncharacterized protein (157 aa)
   
          0.594
HMPREF9018_0961
Uncharacterized protein (132 aa)
   
          0.570
HMPREF9018_0255
Cupin domain protein (106 aa)
              0.552
HMPREF9018_0329
Uncharacterized protein (100 aa)
   
          0.530
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (7%) [HD]