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HMPREF9018_0270 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0270" - S-adenosylmethionine:tRNA ribosyltransferase-isomerase in Prevotella amnii
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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HMPREF9018_0270S-adenosylmethionine-tRNA ribosyltransferase-isomerase ; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (394 aa)    
Predicted Functional Partners:
tgt
tRNA-guanine transglycosylase ; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (375 aa)
 
  0.997
HMPREF9018_0256
Putative iron-sulfur cluster-binding protein (310 aa)
 
   
    0.985
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (233 aa)
   
   
  0.930
folK
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (140 aa)
   
        0.908
uppP
Undecaprenyl pyrophosphate phosphatase ; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin (284 aa)
 
        0.812
ruvB
Holliday junction ATP-dependent DNA helicase RuvB ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing (345 aa)
 
 
  0.808
queF
PreQ(0) reductase ; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (152 aa)
       
  0.790
secD
Export membrane protein SecD ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (1008 aa)
   
   
  0.781
HMPREF9018_0273
Uncharacterized protein (78 aa)
              0.735
pheT
Phenylalanyl-tRNA synthetase beta subunit (822 aa)
         
  0.716
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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