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truB protein (Prevotella amnii) - STRING interaction network
"truB" - tRNA-uridine isomerase in Prevotella amnii
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
truBtRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (233 aa)    
Predicted Functional Partners:
HMPREF9018_0270
S-adenosylmethionine-tRNA ribosyltransferase-isomerase ; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (394 aa)
   
   
  0.930
rpsA
30S ribosomal protein S1 (593 aa)
   
 
  0.928
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (514 aa)
     
   
  0.907
truA
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (257 aa)
 
  0.898
folK
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (140 aa)
   
        0.885
ribF
Riboflavin biosynthesis protein (313 aa)
 
   
  0.866
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (966 aa)
 
 
  0.849
HMPREF9018_0273
Uncharacterized protein (78 aa)
 
          0.842
rpoA
Transcriptase subunit alpha ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (332 aa)
   
 
  0.841
HMPREF9018_1651
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (361 aa)
 
   
  0.825
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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