STRINGSTRING
HMPREF9018_0280 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0280" - Uncharacterized protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0280Uncharacterized protein (469 aa)    
Predicted Functional Partners:
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase ; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (505 aa)
     
 
    0.741
HMPREF9018_1176
Transporter, small conductance mechanosensitive ion channel MscS family protein (792 aa)
 
        0.628
HMPREF9018_0339
TonB-dependent receptor (781 aa)
   
          0.609
HMPREF9018_0003
Transporter, major facilitator family protein (391 aa)
   
          0.577
HMPREF9018_1329
Putative pantothenate kinase (282 aa)
 
          0.554
HMPREF9018_0278
Outer membrane protein, OMP85 family (780 aa)
 
          0.553
HMPREF9018_0281
ATP-binding cassette protein, ChvD family (565 aa)
   
        0.537
HMPREF9018_0279
Uncharacterized protein (1706 aa)
              0.534
HMPREF9018_1192
Uncharacterized protein (785 aa)
   
          0.460
HMPREF9018_0783
Uncharacterized protein (162 aa)
   
          0.449
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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