STRINGSTRING
HMPREF9018_0283 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0283" - Uncharacterized protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0283Uncharacterized protein (113 aa)    
Predicted Functional Partners:
yfiO
Outer membrane assembly lipoprotein YfiO (309 aa)
 
          0.953
HMPREF9018_0282
Uncharacterized protein (150 aa)
 
          0.893
HMPREF9018_1978
Type I restriction enzyme HsdR protein N-terminal domain protein (148 aa)
   
          0.765
HMPREF9018_1111
Uncharacterized protein (432 aa)
   
          0.753
HMPREF9018_0258
Uncharacterized protein (1110 aa)
   
          0.749
HMPREF9018_0194
Uncharacterized protein (199 aa)
   
          0.742
HMPREF9018_0404
Putative zinc ribbon domain protein (274 aa)
   
          0.730
luxS
S-ribosylhomocysteine lyase ; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) (159 aa)
              0.730
lepB
Signal peptidase I (510 aa)
 
          0.729
HMPREF9018_0693
Uncharacterized protein (264 aa)
   
          0.729
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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