STRINGSTRING
HMPREF9018_0294 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0294" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0294Uncharacterized protein (200 aa)    
Predicted Functional Partners:
HMPREF9018_0295
Uncharacterized protein (229 aa)
 
          0.968
HMPREF9018_0293
Transporter, MotA/TolQ/ExbB proton channel family protein (279 aa)
 
          0.936
HMPREF9018_0296
TonB-dependent receptor (294 aa)
 
          0.935
HMPREF9018_0291
Uncharacterized protein (320 aa)
 
          0.785
HMPREF9018_0290
Tetratricopeptide repeat protein (470 aa)
 
          0.778
HMPREF9018_1703
Uncharacterized protein (203 aa)
   
          0.708
HMPREF9018_1575
Uncharacterized protein (389 aa)
   
          0.617
HMPREF9018_1581
Uncharacterized protein (261 aa)
   
          0.605
HMPREF9018_0297
Uncharacterized protein (43 aa)
              0.600
HMPREF9018_1084
Uncharacterized protein (154 aa)
   
          0.599
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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