STRINGSTRING
HMPREF9018_0298 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0298" - Uncharacterized protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0298Uncharacterized protein (253 aa)    
Predicted Functional Partners:
gidB
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (208 aa)
              0.845
HMPREF9018_0297
Uncharacterized protein (43 aa)
              0.681
ruvC
Holliday junction resolvase RuvC ; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (193 aa)
              0.671
HMPREF9018_0300
Metallo-beta-lactamase domain protein (214 aa)
              0.671
HMPREF9018_0296
TonB-dependent receptor (294 aa)
              0.562
HMPREF9018_0295
Uncharacterized protein (229 aa)
              0.486
HMPREF9018_0294
Uncharacterized protein (200 aa)
              0.486
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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