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HMPREF9018_0323 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0323" - Tetratricopeptide repeat protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
HMPREF9018_0323Tetratricopeptide repeat protein (204 aa)    
Predicted Functional Partners:
def
Polypeptide deformylase ; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (186 aa)
              0.767
HMPREF9018_0290
Tetratricopeptide repeat protein (470 aa)
   
          0.693
HMPREF9018_0892
Tetratricopeptide repeat domain protein (417 aa)
   
          0.608
HMPREF9018_0326
Sporulation and cell division repeat protein (159 aa)
              0.589
HMPREF9018_0325
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (139 aa)
              0.589
HMPREF9018_0279
Uncharacterized protein (1706 aa)
   
          0.580
HMPREF9018_0296
TonB-dependent receptor (294 aa)
   
          0.577
HMPREF9018_1726
Uncharacterized protein (140 aa)
   
          0.576
HMPREF9018_0486
Uncharacterized protein (616 aa)
   
          0.566
HMPREF9018_0500
Antioxidant, AhpC/TSA family (384 aa)
   
          0.521
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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