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HMPREF9018_0325 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0325" - Putative pre-16S rRNA nuclease in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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HMPREF9018_0325Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (139 aa)    
Predicted Functional Partners:
HMPREF9018_0326
Sporulation and cell division repeat protein (159 aa)
              0.864
def
Polypeptide deformylase ; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (186 aa)
              0.771
pyrE
Orotate phosphoribosyltransferase ; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (210 aa)
       
    0.659
HMPREF9018_0327
Uncharacterized protein (98 aa)
              0.609
HMPREF9018_0328
Uncharacterized protein (116 aa)
              0.598
HMPREF9018_0323
Tetratricopeptide repeat protein (204 aa)
              0.589
nadC
Nicotinate-nucleotide diphosphorylase (Carboxylating) (290 aa)
       
    0.496
HMPREF9018_0329
Uncharacterized protein (100 aa)
              0.496
nadB
L-aspartate oxidase ; Catalyzes the oxidation of L-aspartate to iminoaspartate (525 aa)
       
    0.489
recJ
Single-stranded-DNA-specific exonuclease RecJ (574 aa)
   
      0.468
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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