STRINGSTRING
HMPREF9018_0334 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0334" - HD domain protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0334HD domain protein (212 aa)    
Predicted Functional Partners:
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase ; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) (318 aa)
              0.863
HMPREF9018_0332
Uncharacterized protein (787 aa)
 
          0.832
HMPREF9018_1171
Uncharacterized protein (204 aa)
   
          0.729
HMPREF9018_1329
Putative pantothenate kinase (282 aa)
   
          0.680
guaD
Cytidine and deoxycytidylate deaminase zinc-binding region (155 aa)
              0.675
HMPREF9018_0965
Uncharacterized protein (88 aa)
   
          0.674
HMPREF9018_0986
Uncharacterized protein (90 aa)
   
          0.672
HMPREF9018_1185
Uncharacterized protein (333 aa)
   
          0.655
HMPREF9018_1720
Uncharacterized protein (416 aa)
   
          0.647
HMPREF9018_1633
Uncharacterized protein (271 aa)
   
          0.644
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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