STRINGSTRING
HMPREF9018_0362 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0362" - Integrase in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0362Integrase (301 aa)    
Predicted Functional Partners:
HMPREF9018_0361
Site-specific recombinase, phage integrase family (213 aa)
          0.952
HMPREF9018_0865
Uncharacterized protein (87 aa)
   
          0.772
HMPREF9018_1128
Uncharacterized protein (72 aa)
   
          0.755
HMPREF9018_1458
DNA binding domain, excisionase family (96 aa)
   
          0.737
HMPREF9018_1416
Uncharacterized protein (95 aa)
   
          0.737
HMPREF9018_0116
DNA binding domain, excisionase family (96 aa)
   
          0.735
HMPREF9018_1538
DNA binding domain, excisionase family (96 aa)
   
          0.730
HMPREF9018_0544
DNA binding domain, excisionase family (96 aa)
   
          0.717
HMPREF9018_0117
DNA binding domain, excisionase family (100 aa)
   
          0.668
HMPREF9018_1537
Uncharacterized protein (95 aa)
   
          0.606
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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