STRINGSTRING
ackA protein (Prevotella amnii) - STRING interaction network
"ackA" - Acetokinase in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetokinase ; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction (402 aa)    
Predicted Functional Partners:
pta
Phosphate acetyltransferase (349 aa)
 
  0.999
HMPREF9018_0082
Phosphate acetyl/butyryl transferase (307 aa)
 
  0.977
HMPREF9018_0405
MaoC-like protein (154 aa)
       
  0.823
HMPREF9018_1601
AMP-binding enzyme (433 aa)
       
  0.762
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1191 aa)
   
   
  0.738
HMPREF9018_1350
Malate dehydrogenase (Oxaloacetate-decarboxylating) (428 aa)
         
  0.728
HMPREF9018_1116
2-oxoacid-acceptor oxidoreductase, alpha subunit (632 aa)
   
   
  0.702
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (317 aa)
   
   
  0.586
fba
Fructose-1,6-bisphosphate aldolase, class II (337 aa)
   
   
  0.580
HMPREF9018_0368
Putative FeS assembly SUF system protein (106 aa)
              0.573
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (2%) [HD]