STRINGSTRING
HMPREF9018_0389 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0389" - Endonuclease/exonuclease/phosphatase family protein in Prevotella amnii
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0389Endonuclease/exonuclease/phosphatase family protein (365 aa)    
Predicted Functional Partners:
HMPREF9018_0388
Peptidase, S54 family (318 aa)
         
  0.825
yfiO
Outer membrane assembly lipoprotein YfiO (309 aa)
   
          0.710
HMPREF9018_0332
Uncharacterized protein (787 aa)
   
          0.680
HMPREF9018_0258
Uncharacterized protein (1110 aa)
   
          0.645
HMPREF9018_0885
Uncharacterized protein (479 aa)
   
          0.642
HMPREF9018_0408
Uncharacterized protein (688 aa)
   
          0.641
HMPREF9018_0261
Uncharacterized protein (219 aa)
   
          0.638
secD
Export membrane protein SecD ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (1008 aa)
              0.607
HMPREF9018_1108
WbqC-like protein (204 aa)
 
          0.604
HMPREF9018_2058
LysM domain protein (458 aa)
   
          0.588
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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