STRINGSTRING
HMPREF9018_0392 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0392" - Peptidase C1-like family in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0392Peptidase C1-like family (399 aa)    
Predicted Functional Partners:
HMPREF9018_0676
Endonuclease/exonuclease/phosphatase family protein (315 aa)
   
          0.596
secG
Preprotein translocase, SecG subunit (122 aa)
   
          0.578
HMPREF9018_0273
Uncharacterized protein (78 aa)
   
          0.567
HMPREF9018_1081
Uncharacterized protein (706 aa)
   
          0.546
HMPREF9018_0997
Uncharacterized protein (96 aa)
   
          0.543
HMPREF9018_1584
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (310 aa)
   
          0.532
HMPREF9018_0012
Peptidase family M49 (658 aa)
   
          0.528
HMPREF9018_1971
Peptidase, S9A/B/C family, catalytic domain protein (713 aa)
   
          0.476
HMPREF9018_0976
Uncharacterized protein (405 aa)
   
          0.476
HMPREF9018_0977
TonB-dependent receptor (707 aa)
   
          0.475
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (5%) [HD]