STRINGSTRING
HMPREF9018_0409 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0409" - Transglycosylase in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0409Transglycosylase (767 aa)    
Predicted Functional Partners:
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase ; Cell wall formation (229 aa)
 
0.980
HMPREF9018_1565
Putative penicillin-binding protein 2 (711 aa)
 
 
  0.900
HMPREF9018_0163
Penicillin-binding protein, transpeptidase domain protein (717 aa)
 
 
  0.867
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase ; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (367 aa)
       
  0.818
HMPREF9018_0619
Hydrolase, carbon-nitrogen family (295 aa)
       
    0.797
nadE
NAD+ synthase (655 aa)
       
    0.715
dacB
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (445 aa)
         
  0.709
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) (443 aa)
 
          0.640
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase ; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (437 aa)
 
     
  0.639
HMPREF9018_0699
N-acetylmuramoyl-L-alanine amidase (407 aa)
 
 
      0.620
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (8%) [HD]