STRINGSTRING
HMPREF9018_0456 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0456" - Helicase C-terminal domain protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0456Helicase C-terminal domain protein (3762 aa)    
Predicted Functional Partners:
HMPREF9018_1152
Uncharacterized protein (349 aa)
 
          0.736
metK
Methionine adenosyltransferase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (430 aa)
       
    0.696
HMPREF9018_0455
Uncharacterized protein (658 aa)
              0.671
HMPREF9018_0951
Cytosine-specific methyltransferase (492 aa)
 
   
    0.625
HMPREF9018_1802
N-6 DNA Methylase (1534 aa)
 
       
0.609
HMPREF9018_0637
Uncharacterized protein (1507 aa)
 
       
0.608
HMPREF9018_1804
DNA topoisomerase III (163 aa)
              0.564
HMPREF9018_1803
DNA topoisomerase (459 aa)
              0.564
HMPREF9018_1165
No annotation available (54 aa)
              0.564
HMPREF9018_0638
DNA topoisomerase (671 aa)
              0.564
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (5%) [HD]