STRINGSTRING
HMPREF9018_0483 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0483" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0483Uncharacterized protein (234 aa)    
Predicted Functional Partners:
HMPREF9018_0482
Aminotransferase, class I/II (410 aa)
 
          0.885
HMPREF9018_1292
Glycosyltransferase, group 2 family protein (1112 aa)
   
          0.601
HMPREF9018_1122
Uncharacterized protein (238 aa)
   
          0.592
HMPREF9018_1540
Transcriptional regulator, LuxR family (251 aa)
   
          0.574
HMPREF9018_0481
Uncharacterized protein (871 aa)
              0.557
HMPREF9018_0823
Uncharacterized protein (389 aa)
   
          0.473
HMPREF9018_1929
Oxidoreductase, short chain dehydrogenase/reductase family protein (233 aa)
   
          0.446
HMPREF9018_0822
Uncharacterized protein (366 aa)
   
          0.443
HMPREF9018_1797
Uncharacterized protein (168 aa)
   
          0.437
HMPREF9018_1837
ABC transporter, ATP-binding protein (273 aa)
   
          0.420
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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