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sufB protein (Prevotella amnii) - STRING interaction network
"sufB" - FeS assembly protein SufB in Prevotella amnii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
sufBFeS assembly protein SufB (481 aa)    
Predicted Functional Partners:
sufC
FeS assembly ATPase SufC (251 aa)
  0.999
sufD
FeS assembly protein SufD (447 aa)
 
0.999
sufS
Cysteine desulfurase ; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (405 aa)
 
  0.990
sufE
Fe-S metabolism associated domain protein (139 aa)
 
 
  0.867
alr
Alanine racemase (849 aa)
       
    0.732
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (966 aa)
   
        0.717
nusA
Transcription termination/antitermination protein NusA ; Participates in both transcription termination and antitermination (421 aa)
              0.566
fusA
Elongation factor G ; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (704 aa)
   
 
  0.539
HMPREF9018_0815
Translation elongation factor G (718 aa)
   
 
  0.539
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (200 aa)
   
        0.507
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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