STRINGSTRING
HMPREF9018_0500 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0500" - Antioxidant, AhpC/TSA family in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0500Antioxidant, AhpC/TSA family (384 aa)    
Predicted Functional Partners:
HMPREF9018_0016
Uncharacterized protein (203 aa)
   
          0.771
HMPREF9018_0894
Uncharacterized protein (387 aa)
   
          0.768
HMPREF9018_1726
Uncharacterized protein (140 aa)
   
          0.764
HMPREF9018_1581
Uncharacterized protein (261 aa)
   
          0.764
HMPREF9018_0879
Sporulation and cell division repeat protein (244 aa)
   
          0.761
HMPREF9018_1373
Uncharacterized protein (297 aa)
   
          0.755
HMPREF9018_0892
Tetratricopeptide repeat domain protein (417 aa)
   
          0.754
HMPREF9018_2059
Uncharacterized protein (250 aa)
   
          0.740
HMPREF9018_0893
Tetratricopeptide repeat protein (368 aa)
   
          0.740
HMPREF9018_0486
Uncharacterized protein (616 aa)
   
          0.739
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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