STRINGSTRING
HMPREF9018_0502 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0502" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0502Uncharacterized protein (274 aa)    
Predicted Functional Partners:
HMPREF9018_1601
AMP-binding enzyme (433 aa)
   
 
  0.748
HMPREF9018_0848
Uncharacterized protein (333 aa)
   
 
  0.748
HMPREF9018_1827
AMP-binding enzyme (613 aa)
   
 
    0.730
HMPREF9018_0157
AMP-binding enzyme (553 aa)
   
 
    0.730
HMPREF9018_1899
Aminotransferase, class I/II (398 aa)
   
 
    0.726
HMPREF9018_0292
Aminotransferase, class I/II (398 aa)
   
 
    0.726
HMPREF9018_0970
Sugar isomerase, KpsF/GutQ family (324 aa)
       
  0.726
nadE
NAD+ synthase (655 aa)
   
 
  0.713
HMPREF9018_1146
4-phosphoerythronate dehydrogenase (323 aa)
   
 
    0.711
HMPREF9018_1350
Malate dehydrogenase (Oxaloacetate-decarboxylating) (428 aa)
   
 
    0.709
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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