STRINGSTRING
HMPREF9018_0504 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0504" - Hydrolase, NUDIX family in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0504Hydrolase, NUDIX family (176 aa)    
Predicted Functional Partners:
prs
Ribose-phosphate diphosphokinase (312 aa)
       
    0.666
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (782 aa)
              0.621
aroK
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (193 aa)
 
          0.620
HMPREF9018_0503
Uncharacterized protein (38 aa)
              0.521
speA
Biosynthetic arginine decarboxylase ; Catalyzes the biosynthesis of agmatine from arginine (630 aa)
              0.473
HMPREF9018_0502
Uncharacterized protein (274 aa)
              0.421
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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