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speA protein (Prevotella amnii) - STRING interaction network
"speA" - Biosynthetic arginine decarboxylase in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
speABiosynthetic arginine decarboxylase ; Catalyzes the biosynthesis of agmatine from arginine (630 aa)    
Predicted Functional Partners:
HMPREF9018_0620
Uncharacterized protein (360 aa)
 
   
  0.888
HMPREF9018_0619
Hydrolase, carbon-nitrogen family (295 aa)
       
  0.813
rpmH
50S ribosomal protein L34 (51 aa)
     
      0.784
HMPREF9018_1899
Aminotransferase, class I/II (398 aa)
       
    0.747
HMPREF9018_0292
Aminotransferase, class I/II (398 aa)
       
    0.747
nadE
NAD+ synthase (655 aa)
       
  0.719
aroK
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (193 aa)
              0.709
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (782 aa)
              0.661
HMPREF9018_0508
Sigma-70 region 2 (170 aa)
              0.545
HMPREF9018_0509
Uncharacterized protein (159 aa)
              0.545
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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