STRINGSTRING
HMPREF9018_0510 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0510" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0510Uncharacterized protein (926 aa)    
Predicted Functional Partners:
HMPREF9018_1084
Uncharacterized protein (154 aa)
   
          0.593
HMPREF9018_0109
Eco57I restriction endonuclease (1253 aa)
   
          0.551
HMPREF9018_1784
Conjugative transposon protein TraA (265 aa)
   
          0.536
HMPREF9018_1315
Divergent AAA domain protein (514 aa)
   
          0.522
HMPREF9018_1008
Polysaccharide deacetylase (257 aa)
   
          0.505
HMPREF9018_0742
Uncharacterized protein (291 aa)
   
          0.494
HMPREF9018_0963
FG-GAP repeat protein (1919 aa)
   
          0.491
HMPREF9018_1765
Uncharacterized protein (201 aa)
   
          0.482
HMPREF9018_1783
Uncharacterized protein (176 aa)
   
          0.481
HMPREF9018_2065
Uncharacterized protein (193 aa)
   
          0.462
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (37%) [HD]