STRINGSTRING
HMPREF9018_0512 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0512" - TIGR02757 family protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0512TIGR02757 family protein (263 aa)    
Predicted Functional Partners:
HMPREF9018_0511
HTH domain protein (312 aa)
              0.783
HMPREF9018_0513
Antioxidant, AhpC/TSA family (151 aa)
              0.691
HMPREF9018_1363
Uncharacterized protein (348 aa)
   
          0.449
HMPREF9018_0515
NAD dependent epimerase/dehydratase family protein (350 aa)
              0.447
HMPREF9018_0516
MEP cytidylyltransferase ; Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) (239 aa)
              0.446
HMPREF9018_0514
Uncharacterized protein (297 aa)
              0.446
HMPREF9018_1362
Uncharacterized protein (234 aa)
   
          0.439
HMPREF9018_0026
Peptidase M16 inactive domain protein (936 aa)
 
          0.421
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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