STRINGSTRING
HMPREF9018_0514 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0514" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0514Uncharacterized protein (297 aa)    
Predicted Functional Partners:
HMPREF9018_0515
NAD dependent epimerase/dehydratase family protein (350 aa)
              0.859
HMPREF9018_0516
MEP cytidylyltransferase ; Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) (239 aa)
              0.859
HMPREF9018_0517
LICD family protein (277 aa)
              0.732
HMPREF9018_0518
Uncharacterized protein (44 aa)
              0.562
HMPREF9018_0513
Antioxidant, AhpC/TSA family (151 aa)
              0.545
HMPREF9018_0512
TIGR02757 family protein (263 aa)
              0.446
HMPREF9018_0519
Polysaccharide biosynthesis protein (481 aa)
              0.430
HMPREF9018_0511
HTH domain protein (312 aa)
              0.413
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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