STRINGSTRING
HMPREF9018_0519 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0519" - Polysaccharide biosynthesis protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0519Polysaccharide biosynthesis protein (481 aa)    
Predicted Functional Partners:
HMPREF9018_0517
LICD family protein (277 aa)
              0.675
HMPREF9018_0515
NAD dependent epimerase/dehydratase family protein (350 aa)
   
   
  0.672
HMPREF9018_0518
Uncharacterized protein (44 aa)
              0.634
HMPREF9018_1890
Glycosyltransferase, group 1 family protein (358 aa)
 
   
  0.529
HMPREF9018_1292
Glycosyltransferase, group 2 family protein (1112 aa)
     
 
  0.516
HMPREF9018_1964
Uncharacterized protein (361 aa)
 
          0.499
HMPREF9018_1888
Bacterial sugar transferase (202 aa)
   
   
  0.492
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)
   
   
  0.490
HMPREF9018_1007
Glycosyltransferase, group 2 family protein (326 aa)
   
 
  0.490
HMPREF9018_0782
Glycosyltransferase, group 2 family protein (318 aa)
   
 
  0.490
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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