STRINGSTRING
HMPREF9018_0528 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0528" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0528Uncharacterized protein (159 aa)    
Predicted Functional Partners:
HMPREF9018_0529
ABC transporter, ATP-binding protein (729 aa)
 
          0.945
HMPREF9018_0530
Uncharacterized protein (186 aa)
              0.805
HMPREF9018_0552
Uncharacterized protein (123 aa)
   
          0.763
HMPREF9018_1546
ABC transporter, ATP-binding protein (733 aa)
 
          0.719
HMPREF9018_1363
Uncharacterized protein (348 aa)
   
          0.717
HMPREF9018_1457
Uncharacterized protein (169 aa)
   
          0.649
HMPREF9018_0245
ABC transporter transmembrane region (444 aa)
 
          0.629
HMPREF9018_1362
Uncharacterized protein (234 aa)
   
          0.617
HMPREF9018_0481
Uncharacterized protein (871 aa)
   
          0.603
HMPREF9018_0478
Radical SAM domain protein (416 aa)
 
          0.551
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (3%) [HD]