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STRINGSTRING
EFN90929.1 protein (Prevotella amnii) - STRING interaction network
"EFN90929.1" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN90929.1Uncharacterized protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift (123 aa)    
Predicted Functional Partners:
EFN91528.1
annotation not available (337 aa)
 
          0.684
EFN90962.1
annotation not available (159 aa)
 
          0.673
EFN92085.1
annotation not available (159 aa)
 
          0.617
EFN91530.1
annotation not available (330 aa)
 
          0.565
EFN90934.1
annotation not available (764 aa)
 
          0.555
EFN90958.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055 (486 aa)
 
          0.492
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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