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HMPREF9018_0589 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0589" - 3'-5' exonuclease domain family protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_05893’-5’ exonuclease domain family protein (153 aa)    
Predicted Functional Partners:
tilS
tRNA(Ile)-lysidine synthetase ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (456 aa)
              0.783
HMPREF9018_0590
PUA domain protein (401 aa)
              0.783
HMPREF9018_0588
Uncharacterized protein (50 aa)
              0.692
HMPREF9018_0061
Glycosyl hydrolase, family 57 (453 aa)
   
          0.689
HMPREF9018_0060
Glycosyltransferase, group 1 family protein (422 aa)
   
          0.623
HMPREF9018_1726
Uncharacterized protein (140 aa)
   
          0.613
HMPREF9018_0016
Uncharacterized protein (203 aa)
   
          0.601
HMPREF9018_0587
FtsK/SpoIIIE family protein (820 aa)
              0.520
HMPREF9018_1940
Uncharacterized protein (586 aa)
   
          0.483
HMPREF9018_0586
Uncharacterized protein (204 aa)
 
          0.479
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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