STRINGSTRING
HMPREF9018_0598 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0598" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0598Uncharacterized protein (305 aa)    
Predicted Functional Partners:
rlmN
tRNA m2A37 methyltransferase ; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (347 aa)
              0.859
HMPREF9018_0666
Uncharacterized protein (154 aa)
   
          0.774
HMPREF9018_0667
Uncharacterized protein (179 aa)
   
          0.722
pdxA
Pyridoxal phosphate biosynthetic protein PdxA (366 aa)
              0.686
HMPREF9018_2014
Uncharacterized protein (144 aa)
   
          0.683
HMPREF9018_0391
Phosphatidylinositol-specific phospholipase C, X domain protein (667 aa)
   
          0.639
HMPREF9018_0961
Uncharacterized protein (132 aa)
   
          0.581
HMPREF9018_0964
Uncharacterized protein (990 aa)
   
          0.574
HMPREF9018_1353
Uncharacterized protein (686 aa)
   
          0.564
HMPREF9018_1363
Uncharacterized protein (348 aa)
   
          0.560
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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