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STRINGSTRING
EFN90208.1 protein (Prevotella amnii) - STRING interaction network
"EFN90208.1" - Site-specific recombinase, phage integrase family in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFN90208.1Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the ’phage’ integrase family (456 aa)    
Predicted Functional Partners:
EFN90210.1
Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the ’phage’ integrase family (439 aa)
 
       
0.876
EFN90209.1
Identified by match to protein family HMM PF08989 (136 aa)
              0.629
EFN90995.1
DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764 (103 aa)
   
          0.591
EFN91991.1
annotation not available (168 aa)
   
          0.590
EFN90212.1
annotation not available (168 aa)
   
          0.585
EFN91987.1
DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764 (104 aa)
   
          0.577
EFN90206.1
DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764 (104 aa)
   
          0.548
EFN90205.1
annotation not available (1507 aa)
              0.518
EFN90207.1
annotation not available (139 aa)
   
          0.431
EFN91990.1
annotation not available (139 aa)
   
          0.427
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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