STRINGSTRING
HMPREF9018_0637 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0637" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0637Uncharacterized protein (1507 aa)    
Predicted Functional Partners:
HMPREF9018_1485
Helicase C-terminal domain protein (491 aa)
          0.969
HMPREF9018_0638
DNA topoisomerase (671 aa)
 
          0.909
HMPREF9018_1152
Uncharacterized protein (349 aa)
          0.888
HMPREF9018_1803
DNA topoisomerase (459 aa)
 
          0.749
metK
Methionine adenosyltransferase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (430 aa)
       
    0.696
HMPREF9018_0456
Helicase C-terminal domain protein (3762 aa)
 
       
0.608
HMPREF9018_1768
Uncharacterized protein (84 aa)
   
          0.603
HMPREF9018_1495
Uncharacterized protein (84 aa)
   
          0.582
HMPREF9018_1804
DNA topoisomerase III (163 aa)
              0.564
HMPREF9018_1165
No annotation available (54 aa)
              0.564
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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