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HMPREF9018_0673 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0673" - CAAX amino terminal protease family protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0673CAAX amino terminal protease family protein (276 aa)    
Predicted Functional Partners:
ribF
Riboflavin biosynthesis protein (313 aa)
              0.759
HMPREF9018_0674
Calcium-translocating P-type ATPase, PMCA-type (904 aa)
              0.758
HMPREF9018_0675
Putative 3-deoxy-7-phosphoheptulonate synthase (356 aa)
              0.595
HMPREF9018_0763
Uncharacterized protein (283 aa)
   
          0.549
HMPREF9018_1633
Uncharacterized protein (271 aa)
   
          0.512
HMPREF9018_0662
Uncharacterized protein (185 aa)
   
          0.506
HMPREF9018_1388
Uncharacterized protein (49 aa)
   
          0.470
HMPREF9018_0668
Uncharacterized protein (170 aa)
   
          0.470
HMPREF9018_0965
Uncharacterized protein (88 aa)
   
          0.469
HMPREF9018_1842
Uncharacterized protein (204 aa)
   
          0.464
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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