STRINGSTRING
HMPREF9018_0688 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0688" - Dihydroorotase in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0688Dihydroorotase (449 aa)    
Predicted Functional Partners:
pyrB
Aspartate transcarbamylase (315 aa)
  0.999
carB
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) (1074 aa)
 
  0.995
carA
Carbamoyl-phosphate synthetase glutamine chain (358 aa)
 
  0.991
HMPREF9018_1886
ATP-grasp domain protein (333 aa)
   
  0.986
pyrD
Dihydroorotate dehydrogenase ; Catalyzes the conversion of dihydroorotate to orotate (302 aa)
 
  0.982
gltA
Glutamate synthase (NADPH), homotetrameric (766 aa)
 
  0.971
purL
Formylglycinamide ribonucleotide amidotransferase ; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1247 aa)
 
   
  0.930
HMPREF9018_0224
Oxidoreductase NAD-binding domain protein (256 aa)
   
 
    0.874
pyrI
Aspartate carbamoyltransferase regulatory chain ; Involved in allosteric regulation of aspartate carbamoyltransferase (156 aa)
       
    0.870
HMPREF9018_0681
4Fe-4S binding domain protein (77 aa)
   
 
  0.868
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (9%) [HD]