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soj protein (Prevotella amnii) - STRING interaction network
"soj" - CobQ/CobB/MinD/ParA nucleotide binding domain protein in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sojCobQ/CobB/MinD/ParA nucleotide binding domain protein (254 aa)    
Predicted Functional Partners:
HMPREF9018_0694
ParB-like protein (303 aa)
 
  0.987
HMPREF9018_0693
Uncharacterized protein (264 aa)
              0.753
HMPREF9018_0838
ATPase family associated with various cellular activities (AAA) (331 aa)
   
 
    0.716
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (467 aa)
   
 
  0.684
surE
Nucleoside 5’-monophosphate phosphohydrolase ; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (253 aa)
              0.643
xerC
Tyrosine recombinase XerC (310 aa)
 
   
  0.549
HMPREF9018_0692
RelA/SpoT family protein ; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (729 aa)
   
   
  0.542
lpxB
Lipid-A-disaccharide synthase ; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (382 aa)
              0.520
polA
DNA-directed DNA polymerase (945 aa)
   
   
  0.516
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (514 aa)
         
  0.511
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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