STRINGSTRING
HMPREF9018_0698 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0698" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0698Uncharacterized protein (326 aa)    
Predicted Functional Partners:
HMPREF9018_1863
Uncharacterized protein (248 aa)
 
   
    0.903
HMPREF9018_1862
ABC transporter, ATP-binding protein (259 aa)
 
 
    0.890
HMPREF9018_0699
N-acetylmuramoyl-L-alanine amidase (407 aa)
              0.877
folB
7,8-dihydroneopterin aldolase ; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (136 aa)
              0.777
HMPREF9018_0753
Uncharacterized protein (952 aa)
 
          0.591
HMPREF9018_0693
Uncharacterized protein (264 aa)
   
          0.591
HMPREF9018_0287
Uncharacterized protein (840 aa)
   
          0.590
HMPREF9018_1723
Uncharacterized protein (215 aa)
   
          0.558
HMPREF9018_1365
Permease, YjgP/YjgQ family (633 aa)
 
          0.556
HMPREF9018_0296
TonB-dependent receptor (294 aa)
   
          0.526
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
Server load: low (2%) [HD]