STRINGSTRING
recR protein (Prevotella amnii) - STRING interaction network
"recR" - Recombination protein RecR in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
recRRecombination protein RecR ; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (202 aa)    
Predicted Functional Partners:
recF
DNA replication and repair protein RecF ; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (368 aa)
 
 
  0.894
HMPREF9018_0728
Acetyltransferase, GNAT family (179 aa)
              0.851
HMPREF9018_0727
Uncharacterized protein (150 aa)
              0.834
HMPREF9018_0725
Uncharacterized protein (159 aa)
              0.805
recN
Recombination protein N ; May be involved in recombinational repair of damaged DNA (553 aa)
 
     
  0.741
recG
ATP-dependent DNA helicase RecG ; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (699 aa)
   
   
  0.722
HMPREF9018_0308
DNA-directed DNA polymerase (1241 aa)
   
   
  0.698
HMPREF9018_0491
DNA helicase (845 aa)
 
 
  0.677
HMPREF9018_1639
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (645 aa)
 
 
  0.662
mfd
Transcription-repair-coupling factor ; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (1178 aa)
 
 
  0.641
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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