STRINGSTRING
mdsC protein (Prevotella amnii) - STRING interaction network
"mdsC" - Mucin-desulfating sulfatase in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdsCMucin-desulfating sulfatase (362 aa)    
Predicted Functional Partners:
HMPREF9018_0731
Uncharacterized protein (219 aa)
 
          0.960
HMPREF9018_1140
Uncharacterized protein (303 aa)
          0.931
HMPREF9018_0733
Putative alpha-1,2-mannosidase (716 aa)
              0.810
HMPREF9018_0734
BNR/Asp-box repeat protein (561 aa)
 
          0.761
rfbB
dTDP-glucose 4,6-dehydratase (384 aa)
       
    0.738
HMPREF9018_0735
Glycosyl hydrolase family 20, catalytic domain protein (706 aa)
 
          0.699
HMPREF9018_1351
Uncharacterized protein (459 aa)
   
          0.422
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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