STRINGSTRING
HMPREF9018_0741 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0741" - Uncharacterized protein in Prevotella amnii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0741Uncharacterized protein (234 aa)    
Predicted Functional Partners:
HMPREF9018_0740
TonB-dependent receptor (783 aa)
 
          0.969
HMPREF9018_0742
Uncharacterized protein (291 aa)
 
          0.966
HMPREF9018_0032
PepSY domain protein (489 aa)
   
          0.749
HMPREF9018_0739
Uncharacterized protein (174 aa)
              0.635
HMPREF9018_0073
TonB-linked outer membrane protein, SusC/RagA family (1032 aa)
   
          0.625
HMPREF9018_0237
TonB-dependent receptor plug domain protein (795 aa)
 
          0.545
HMPREF9018_0069
Uncharacterized protein (290 aa)
   
          0.490
HMPREF9018_1157
Toprim domain protein (687 aa)
   
          0.489
HMPREF9018_1489
Toprim domain protein (687 aa)
   
          0.487
HMPREF9018_1808
Uncharacterized protein (486 aa)
   
          0.476
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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