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HMPREF9018_0776 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0776" - TonB-dependent receptor plug domain protein in Prevotella amnii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0776TonB-dependent receptor plug domain protein (711 aa)    
Predicted Functional Partners:
HMPREF9018_0244
Transcriptional regulator, TetR family (204 aa)
   
          0.615
HMPREF9018_0967
Uncharacterized protein (265 aa)
   
          0.523
HMPREF9018_0237
TonB-dependent receptor plug domain protein (795 aa)
   
          0.485
HMPREF9018_1176
Transporter, small conductance mechanosensitive ion channel MscS family protein (792 aa)
   
          0.460
HMPREF9018_1122
Uncharacterized protein (238 aa)
   
          0.435
HMPREF9018_2001
TonB-dependent receptor (763 aa)
 
   
  0.420
HMPREF9018_1540
Transcriptional regulator, LuxR family (251 aa)
   
          0.420
HMPREF9018_0236
Uncharacterized protein (413 aa)
   
          0.419
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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